Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50991.1InterPro IPR012944; KEGG: phe:Phep_2892 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772509; PFAM: SusD family. (626 aa)    
Predicted Functional Partners:
AEE50990.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_2893 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504772508; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
     0.932
AEE50989.1
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_1219 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; IMG reference gene:2504772507; PFAM: FecR protein.
 
     0.739
AEE48070.1
KEGG: lby:Lbys_3570 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769509.
  
     0.703
AEE50996.1
Alpha-galactosidase; InterPro IPR013222:IPR019599:IPR000111; KEGG: phe:Phep_2887 alpha-galactosidase; PFAM: Glycosyl hydrolase family 98, putative carbohydrate-binding module; Alpha-galactosidase, NEW1 domain; Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase; IMG reference gene:2504772514; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase.
  
     0.638
AEE50998.1
Alpha-galactosidase; InterPro IPR013222:IPR019599:IPR008009:IPR000111; KEGG: phe:Phep_2885 alpha-galactosidase; PFAM: Putative Ig; Alpha-galactosidase, NEW1 domain; Glycosyl hydrolase family 98, putative carbohydrate-binding module; Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; SPTR: Alpha-galactosidase; IMG reference gene:2504772516; PFAM: NPCBM/NEW2 domain; Melibiase; He_PIG associated, NEW1 domain of bacterial glycohydrolase; Putative Ig domain.
  
     0.630
AEE53341.1
COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: psl:Psta_0085 Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774914; PFAM: Prolyl oligopeptidase family.
  
     0.626
AEE53842.1
KEGG: dfe:Dfer_4310 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775421.
  
     0.591
AEE50988.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: sli:Slin_1218 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; IMG reference gene:2504772506; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, si [...]
 
 
   0.590
AEE50995.1
KEGG: sli:Slin_5007 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772513.
  
     0.589
AEE50992.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: bth:BT_3469 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; IMG reference gene:2504772510; PFAM: Domain of Unknown Function (DUF1080).
 
     0.563
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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