STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE51067.1InterPro IPR019734:IPR001440:IPR013105; KEGG: sus:Acid_0104 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein; IMG reference gene:2504772587; PFAM: Tetratricopeptide repeat. (640 aa)    
Predicted Functional Partners:
AEE51129.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440; KEGG: bhy:BHWA1_01643 TPR domain-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR domain-containing protein; IMG reference gene:2504772650.
  
     0.652
AEE52866.1
InterPro IPR001440:IPR013105:IPR019734; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504774438; PFAM: Tetratricopeptide repeat.
 
     0.631
AEE50964.1
Glycosyl transferase family 2; InterPro IPR001173; KEGG: sli:Slin_5753 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2504772481; PFAM: Glycosyl transferase family 2.
  
     0.541
AEE50882.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440; KEGG: mmg:MTBMA_c11120 tetratricopeptide repeat domain-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat domain-containing protein; IMG reference gene:2504772393; PFAM: Tetratricopeptide repeat.
  
     0.536
AEE51068.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: lby:Lbys_0103 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Thioredoxin; IMG reference gene:2504772588; PFAM: Rhodanese-like domain.
       0.504
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
    0.502
AEE52299.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR009671:IPR001440:IPR019734; KEGG: tet:TTHERM_00713550 TPR Domain containing protein; PFAM: Tetratricopeptide TPR-1; Protein of unknown function DUF1260; SPTR: TPR Domain containing protein; IMG reference gene:2504773845; PFAM: Protein of unknown function (DUF1260); Tetratricopeptide repeat.
  
     0.501
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.422
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.