Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
AEE51091.1KEGG: fps:FP1564 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772611. (477 aa)    
Predicted Functional Partners:
AEE51092.1
Hypothetical protein; IMG reference gene:2504772612.
       0.524
AEE51090.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: dde:Dde_2849 ISPg7, transposase; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; IMG reference gene:2504772610; PFAM: Transposase DDE domain; Transposase domain (DUF772).
       0.443
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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