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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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xerCTyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (330 aa)    
Predicted Functional Partners:
AEE49742.1
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: cpi:Cpin_6265 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: Cell divisionFtsK/SpoIIIE; IMG reference gene:2504771218; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
 
   
 0.688
AEE48714.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: mtt:Ftrac_3754 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: ParB-like partition protein; TIGRFAM: ParB-like partition protein; IMG reference gene:2504770167; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
  
  
 0.538
AEE51103.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_5961 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504772623; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
    0.536
AEE51105.1
InterPro IPR002477; KEGG: thx:Thet_2191 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; SPTR: Putative peptidoglycan binding domain protein; IMG reference gene:2504772625; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
  
    0.527
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
   
 0.504
AEE51802.1
COGs: COG1040 amidophosphoribosyltransferase; KEGG: phe:Phep_3856 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; IMG reference gene:2504773339; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
  
    0.479
rpmE2
COGs: COG0254 Ribosomal protein L31; HAMAP: 50S ribosomal protein L31 type B; InterPro IPR002150; KEGG: cpi:Cpin_6211 ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31 type B; TIGRFAM: Ribosomal protein L31; IMG reference gene:2504771786; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31.
  
 
 
 0.469
AEE51102.1
Xenobiotic-transporting ATPase; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: mtt:Ftrac_2278 hlyb/MsbA family ABC transporter; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SPTR: HlyB/MsbA family ABC transporter; IMG reference gene:2504772622; PFAM: ABC transporter transmembrane region.
     
 0.460
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
   
 0.439
AEE48533.1
COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: cpi:Cpin_1939 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; IMG reference gene:2504769980; PFAM: Prephenate dehydrogenase.
  
    0.433
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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