Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51109.1Hypothetical protein; KEGG: sli:Slin_4331 transcriptional regulator, AraC family; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2504772629. (265 aa)    
Predicted Functional Partners:
AEE51110.1
COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: cts:Ctha_0304 acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-hydroxybutyrate CoA transferase; IMG reference gene:2504772630; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.
       0.520
AEE51108.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: sli:Slin_6549 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28; IMG reference gene:2504772628; PFAM: PA domain; Peptidase family M28.
       0.484
AEE51107.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sus:Acid_0065 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; IMG reference gene:2504772627; PFAM: Beta-lactamase; Domain of unknown function (DUF3471).
       0.440
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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