Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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AEE51149.1GntR domain protein; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: sli:Slin_2628 regulatory protein GntR HTH; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Regulatory protein GntR HTH; IMG reference gene:2504772670; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (229 aa)    
Predicted Functional Partners:
AEE51150.1
COGs: COG4409 Neuraminidase (sialidase); KEGG: phe:Phep_3253 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; IMG reference gene:2504772671; PFAM: BNR/Asp-box repeat.
 
     0.821
AEE51153.1
InterPro IPR012944; KEGG: sli:Slin_2626 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772674; PFAM: SusD family.
 
     0.792
AEE51152.1
N-acetylneuraminate lyase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: sli:Slin_2625 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; PRIAM: N-acetylneuraminate lyase; SPTR: Dihydrodipicolinate synthetase; IMG reference gene:2504772673; PFAM: Dihydrodipicolinate synthetase family.
 
   
 0.783
AEE51154.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: sli:Slin_2627 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504772675; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
     0.771
AEE51151.1
SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR006652:IPR019900:IPR001734; KEGG: dfe:Dfer_3022 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; Kelch repeat type 1; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; IMG reference gene:2504772672; PFAM: Kelch motif; Sodium:solute symporter family; TIGRFAM: transporter, SSS family; cyclically-permuted mutatrotase family protein.
 
     0.709
AEE48152.1
Cytidyltransferase-related domain protein; COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: gym:GYMC10_6274 cytidyltransferase-related domain protein; SPTR: Cytidyltransferase-related domain protein; IMG reference gene:2504769591; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
   
    0.630
AEE51148.1
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: csh:Closa_0687 NLP/P60 protein; PFAM: NLP/P60; SPTR: NLP/P60 protein; IMG reference gene:2504772669; PFAM: NlpC/P60 family.
       0.558
AEE54090.1
Glycosyl hydrolase BNR repeat-containing protein; InterPro IPR002860; KEGG: dfe:Dfer_3517 putative O-antigen related protein; PFAM: BNR repeat; SPTR: Putative O-antigen related protein; IMG reference gene:2504775677.
 
   
 0.468
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.455
AEE53007.1
Transcriptional regulator, GntR family with UTRA sensor domain; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: abn:AB57_1945 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2504774579; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
  
 0.451
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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