Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51299.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dfe:Dfer_2636 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; IMG reference gene:2504772824; PFAM: Helix-turn-helix. (495 aa)    
Predicted Functional Partners:
AEE54212.1
KEGG: dfe:Dfer_1322 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775801.
 
     0.572
AEE51298.1
DNA mismatch repair protein MutS domain protein; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: sli:Slin_5542 DNA mismatch repair protein MutS domain protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR: DNA mismatch repair protein MutS; IMG reference gene:2504772823; PFAM: MutS domain V.
       0.563
AEE49855.1
KEGG: cts:Ctha_1971 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771331; PFAM: Secretory lipase.
  
     0.474
AEE49884.1
COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: cpi:Cpin_6916 type I citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate (Si)-synthase; IMG reference gene:2504771365; PFAM: Citrate synthase; TIGRFAM: citrate (Si)-synthase, eukaryotic; Belongs to the citrate synthase family.
  
  
 0.474
AEE54165.1
Hypothetical protein; KEGG: sit:TM1040_0842 peptidase C1A, papain; SPTR: Peptidase C1A, papain; IMG reference gene:2504775754; PFAM: Papain family cysteine protease.
  
     0.472
AEE51300.1
Dipeptidyl-peptidase IV; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: sli:Slin_6185 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Dipeptidyl aminopeptidase IV; IMG reference gene:2504772825; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
       0.468
AEE52460.1
Hypothetical protein; KEGG: mtt:Ftrac_1522 fibronectin type III domain protein; SPTR: Fibronectin type III domain protein; IMG reference gene:2504774016.
  
     0.446
AEE49404.1
PDZ/DHR/GLGF domain protein; COGs: COG0793 Periplasmic protease; InterPro IPR001478; KEGG: mtt:Ftrac_1416 pdz/dhr/glgf domain protein; SMART: PDZ/DHR/GLGF; SPTR: PDZ/DHR/GLGF domain protein; IMG reference gene:2504770873.
  
     0.431
AEE48695.1
KEGG: sli:Slin_1654 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770148.
 
    0.406
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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