Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51338.1KEGG: rmr:Rmar_2423 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; IMG reference gene:2504772864; PFAM: BNR/Asp-box repeat. (1050 aa)    
Predicted Functional Partners:
AEE52945.1
PepSY-associated TM helix domain protein; InterPro IPR005625; KEGG: ran:Riean_1759 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: Putative uncharacterized protein; IMG reference gene:2504774517.
  
     0.629
AEE53855.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2845 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504775434; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.586
AEE51337.1
InterPro IPR010496; KEGG: cpi:Cpin_7277 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; IMG reference gene:2504772863; PFAM: Domain of Unknown Function (DUF1080).
       0.512
AEE51339.1
Protein of unknown function DUF820; COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: sli:Slin_0741 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein; IMG reference gene:2504772865; PFAM: Protein of unknown function (DUF820).
       0.505
AEE51336.1
InterPro IPR011701; KEGG: dfe:Dfer_5059 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2504772862; PFAM: Major Facilitator Superfamily.
       0.435
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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