Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51386.1Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: bth:BT_0834 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative membrane protein; IMG reference gene:2504772912; PFAM: Predicted permease YjgP/YjgQ family. (365 aa)    
Predicted Functional Partners:
AEE50430.1
Fe(3+)-transporting ATPase; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: coc:Coch_1621 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504771926; PFAM: ABC transporter.
 
 
 0.983
AEE48851.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: phe:Phep_3562 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; IMG reference gene:2504770310; PFAM: Predicted permease YjgP/YjgQ family.
  
 
  0.927
AEE50985.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: cpi:Cpin_1052 surface antigen variable number repeat protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Bacterial surface antigen family protein; IMG reference gene:2504772503; PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
     0.729
AEE48220.1
KEGG: cpi:Cpin_6190 putative organic solvent tolerance protein OstA; SPTR: Putative organic solvent tolerance protein OstA; IMG reference gene:2504769663.
 
  
 0.724
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
   
 0.661
lpxC
(3R)-hydroxymyristoyl-(acyl-carrier- protein)dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.633
AEE48979.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fba:FIC_02065 surface antigen (D15); PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen (D15); IMG reference gene:2504770442; PFAM: Surface antigen.
 
     0.630
AEE50275.1
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: cpi:Cpin_1211 protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; SPTR: Putative uncharacterized protein; IMG reference gene:2504771769; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
  
 
 0.624
AEE52366.1
COGs: COG0681 Signal peptidase I; InterPro IPR019759:IPR000223; KEGG: fjo:Fjoh_0206 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; IMG reference gene:2504773913; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
 
     0.619
AEE52542.1
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.608
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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