Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51389.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772915. (375 aa)    
Predicted Functional Partners:
AEE51390.1
KEGG: cpi:Cpin_6215 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772916.
 
     0.862
AEE51391.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_5603 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504772917; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
   0.665
AEE52311.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: gfo:GFO_3253 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Putative uncharacterized protein; IMG reference gene:2504773857; PFAM: Sporulation related domain.
  
     0.580
AEE50934.1
KEGG: cat:CA2559_04895 metal-dependent hydrolase; SPTR: Putative uncharacterized protein; IMG reference gene:2504772451; PFAM: Putative cyclase.
  
     0.537
AEE48885.1
KEGG: sli:Slin_1464 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770346.
  
     0.531
AEE51878.1
Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR013105:IPR001440:IPR019734; KEGG: phe:Phep_0363 tetratricopeptide TPR_3; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_3; IMG reference gene:2504773415.
  
     0.530
AEE50306.1
KEGG: mtt:Ftrac_2067 phosphoribosylpyrophosphate synthetase; SPTR: Phosphoribosylpyrophosphate synthetase; IMG reference gene:2504771801.
  
     0.467
AEE51716.1
Putative membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_1889 membrane protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504773249; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.447
AEE51388.1
RNA-metabolising metallo-beta-lactamase; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: lby:Lbys_2155 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: RNA-metabolising metallo-beta-lactamase; IMG reference gene:2504772914; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.
       0.442
AEE51459.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772988.
  
     0.441
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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