Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51390.1KEGG: cpi:Cpin_6215 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772916. (184 aa)    
Predicted Functional Partners:
AEE51389.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772915.
 
     0.862
AEE51391.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_5603 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504772917; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.547
AEE49879.1
KEGG: chu:CHU_2286 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771360.
  
     0.522
AEE49002.1
Cellulosome anchoring protein cohesin region; InterPro IPR002102:IPR000601; KEGG: fps:FP0688 hypothetical protein; PFAM: Cellulosome anchoring protein, cohesin region; PKD; SPTR: Putative uncharacterized protein; IMG reference gene:2504770465.
  
     0.519
AEE52234.1
InterPro IPR002102; KEGG: hypothetical protein; PFAM: Cellulosome anchoring protein, cohesin region; SPTR: VCBS; IMG reference gene:2504773777.
  
     0.507
AEE50812.1
PKD domain containing protein; InterPro IPR000601; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; SPTR: Putative uncharacterized protein; IMG reference gene:2504772322.
  
     0.490
AEE52841.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284; KEGG: sli:Slin_1208 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: Sigma-70 region 2 domain protein; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504774409; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
     0.488
AEE50216.1
KEGG: sru:SRU_0153 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771707.
  
     0.483
AEE50255.1
KEGG: sru:SRU_0153 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771747.
  
     0.481
AEE53205.1
KEGG: gfo:GFO_3593 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774778.
  
     0.473
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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