Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE51417.1KEGG: fjo:Fjoh_2548 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772944. (151 aa)    
Predicted Functional Partners:
AEE51418.1
KEGG: dfe:Dfer_5078 hypothetical protein; SPTR: Conserved membrane protein YdzA; IMG reference gene:2504772945; TIGRFAM: integral membrane protein.
 
     0.767
AEE52294.1
KEGG: phe:Phep_3781 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773840.
  
     0.512
AEE51416.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: dfe:Dfer_0291 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable IolI protein; IMG reference gene:2504772943; PFAM: Xylose isomerase-like TIM barrel.
       0.509
AEE54117.1
InterPro IPR003544; KEGG: phe:Phep_3222 cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: CcmB protein; IMG reference gene:2504775705; PFAM: ABC-2 type transporter.
  
     0.464
AEE52449.1
InterPro IPR014284; KEGG: cpi:Cpin_1935 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504774005; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
     0.439
AEE52870.1
KEGG: cpi:Cpin_3365 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774442.
  
     0.437
AEE48048.1
COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: cpi:Cpin_3078 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; IMG reference gene:2504769487; PFAM: Cytochrome C assembly protein.
  
     0.431
AEE50960.1
KEGG: cpi:Cpin_2225 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772477.
  
     0.411
AEE54202.1
KEGG: sli:Slin_0526 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775791.
  
     0.402
AEE52888.1
KEGG: cpi:Cpin_2017 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774460; PFAM: PspC domain.
  
     0.401
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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