Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEE51419.1KEGG: rrs:RoseRS_0893 hypothetical protein; SPTR: Conserved domain protein; IMG reference gene:2504772946. (386 aa)    
Predicted Functional Partners:
AEE51420.1
KEGG: sli:Slin_3971 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772947.
       0.517
AEE50881.1
Hypothetical protein; COGs: COG5421 Transposase; KEGG: ana:all7625 hypothetical protein; SPTR: Transposase (IS4 family) protein; IMG reference gene:2504772392; PFAM: Transposase DDE domain.
  
     0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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