Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE51421.1KEGG: cpi:Cpin_0245 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772948. (276 aa)    
Predicted Functional Partners:
AEE50449.1
KEGG: fbc:FB2170_08854 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771950; PFAM: Protein of unknown function (DUF664).
  
     0.511
AEE51420.1
KEGG: sli:Slin_3971 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772947.
       0.493
AEE51422.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: dfe:Dfer_2640 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2504772949; PFAM: Xylose isomerase-like TIM barrel.
       0.439
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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