Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEE51426.1InterPro IPR012944; KEGG: sli:Slin_2453 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772953; PFAM: SusD family. (539 aa)    
Predicted Functional Partners:
AEE51425.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sli:Slin_2454 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504772952; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
     0.929
AEE51424.1
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: dfe:Dfer_1658 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; IMG reference gene:2504772951; PFAM: FecR protein.
 
     0.665
AEE51510.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR011662:IPR012910:IPR000531; KEGG: bth:BT_2461 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504773039; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.634
AEE51427.1
Heparinase II/III family protein; InterPro IPR012480; KEGG: bcv:Bcav_3390 coagulation factor 5/8 type domain protein; PFAM: Heparinase II/III-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504772954; PFAM: Heparinase II/III-like protein.
 
     0.619
AEE51428.1
KEGG: dfe:Dfer_4959 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772955; PFAM: Heparinase II/III-like protein.
 
     0.619
AEE52249.1
Hypothetical protein; KEGG: sli:Slin_6634 nb031; nematoblast specific protein; SPTR: Nb031; nematoblast specific protein; IMG reference gene:2504773792; PFAM: Domain of unknown function (DUF3472).
  
     0.587
AEE47936.1
KEGG: sli:Slin_3122 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769372.
  
     0.578
AEE53105.1
TonB-dependent receptor plug; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: sli:Slin_3040 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; manually curated; IMG reference gene:2504774678; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.561
AEE48560.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_2779 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein; IMG reference gene:2504770008; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.559
AEE53104.1
KEGG: lby:Lbys_2804 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774677.
  
 
   0.543
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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