Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51427.1Heparinase II/III family protein; InterPro IPR012480; KEGG: bcv:Bcav_3390 coagulation factor 5/8 type domain protein; PFAM: Heparinase II/III-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504772954; PFAM: Heparinase II/III-like protein. (613 aa)    
Predicted Functional Partners:
AEE51428.1
KEGG: dfe:Dfer_4959 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772955; PFAM: Heparinase II/III-like protein.
 
     0.836
AEE51426.1
InterPro IPR012944; KEGG: sli:Slin_2453 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772953; PFAM: SusD family.
 
     0.619
AEE51425.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sli:Slin_2454 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504772952; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
     0.566
AEE49425.1
COGs: COG3828 conserved hypothetical protein; KEGG: cpi:Cpin_6423 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770894; PFAM: Trehalose utilisation.
  
     0.467
AEE51570.1
Response regulator receiver; InterPro IPR001789; PFAM: Signal transduction response regulator, receiver region; SPTR: Predicted protein; IMG reference gene:2504773099; PFAM: Response regulator receiver domain.
  
     0.466
AEE48318.1
COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: cyc:PCC7424_3211 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02464; IMG reference gene:2504769762; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused.
  
     0.441
AEE49206.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: pjd:Pjdr2_3667 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2504770672; PFAM: Xylose isomerase-like TIM barrel.
 
    0.429
AEE51509.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bth:BT_2460 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; IMG reference gene:2504773038; PFAM: SusD family.
  
     0.427
AEE53341.1
COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: psl:Psta_0085 Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774914; PFAM: Prolyl oligopeptidase family.
  
     0.406
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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