STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE51428.1KEGG: dfe:Dfer_4959 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772955; PFAM: Heparinase II/III-like protein. (641 aa)    
Predicted Functional Partners:
AEE51427.1
Heparinase II/III family protein; InterPro IPR012480; KEGG: bcv:Bcav_3390 coagulation factor 5/8 type domain protein; PFAM: Heparinase II/III-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504772954; PFAM: Heparinase II/III-like protein.
 
     0.836
AEE49647.1
Acetyl xylan esterase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: sli:Slin_5622 acetyl xylan esterase; SPTR: Acetyl xylan esterase; IMG reference gene:2504771120; PFAM: Acetyl xylan esterase (AXE1).
  
     0.622
AEE51426.1
InterPro IPR012944; KEGG: sli:Slin_2453 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772953; PFAM: SusD family.
 
     0.620
AEE51425.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sli:Slin_2454 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504772952; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
 
     0.601
AEE50995.1
KEGG: sli:Slin_5007 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772513.
  
     0.557
AEE50994.1
KEGG: dfe:Dfer_0638 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772512.
 
     0.526
AEE53230.1
COGs: COG4289 conserved hypothetical protein; InterPro IPR006311:IPR016624; KEGG: mei:Msip34_1828 hypothetical protein; PFAM: Uncharacterised conserved protein UCP014753; SPTR: Putative uncharacterized protein; IMG reference gene:2504774803; PFAM: Uncharacterized protein conserved in bacteria (DUF2264).
 
     0.505
AEE52229.1
Polygalacturonase; COGs: COG5434 Endopygalactorunase; InterPro IPR001087:IPR000743:IPR006626; KEGG: lby:Lbys_1641 glycoside hydrolase family 28; PFAM: Glycoside hydrolase, family 28; Lipase, GDSL; PRIAM: Polygalacturonase; SPTR: Glycoside hydrolase family 28; IMG reference gene:2504773772; PFAM: Glycosyl hydrolases family 28; GDSL-like Lipase/Acylhydrolase.
 
    0.425
AEE51429.1
COGs: COG4993 Glucose dehydrogenase; InterProIPR018391:IPR019551:IPR002372:IPR019556:IPR 003088; KEGG: dfe:Dfer_0311 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; Cytochrome c, class I; PRIAM: Quinoprotein glucose dehydrogenase; SPTR: Pyrrolo-quinoline quinone; IMG reference gene:2504772956; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat.
       0.422
AEE52947.1
KEGG: dfe:Dfer_2379 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774519.
  
     0.421
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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