Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE51554.1Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; IMG reference gene:2504773083; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter. (361 aa)    
Predicted Functional Partners:
AEE51552.1
Demethylmenaquinone methyltransferase-like protein; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: dfe:Dfer_1105 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein; IMG reference gene:2504773081; PFAM: Demethylmenaquinone methyltransferase.
 
     0.759
AEE51553.1
Mandelate racemase/muconate lactonizing protein; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: dfe:Dfer_1106 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; IMG reference gene:2504773082; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: Tat (twin-arginine tr [...]
 
     0.670
AEE48636.1
Demethylmenaquinone methyltransferase-like protein; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: sli:Slin_6067 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein; IMG reference gene:2504770086; PFAM: Demethylmenaquinone methyltransferase.
 
     0.647
AEE48632.1
Demethylmenaquinone methyltransferase-like protein; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: sli:Slin_6192 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein; IMG reference gene:2504770082; PFAM: Demethylmenaquinone methyltransferase.
 
     0.622
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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