Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE51596.1InterPro IPR011701; KEGG: dfe:Dfer_4712 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2504773125; PFAM: Major Facilitator Superfamily. (415 aa)    
Predicted Functional Partners:
AEE51597.1
Cytochrome c class I; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: sli:Slin_5485 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; IMG reference gene:2504773126; PFAM: Glucose / Sorbosone dehydrogenase; Cytochrome c.
       0.554
AEE53582.1
InterPro IPR003400; KEGG: fps:FP2208 biopolymer transport ExbD protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; IMG reference gene:2504775157; PFAM: Biopolymer transport protein ExbD/TolR.
  
 
   0.528
AEE48243.1
InterPro IPR003400; KEGG: phe:Phep_4089 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Outer membrane transport energization protein ExbD; IMG reference gene:2504769686; PFAM: Biopolymer transport protein ExbD/TolR.
  
 
   0.490
AEE48244.1
InterPro IPR003400; KEGG: fps:FP2208 biopolymer transport ExbD protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; IMG reference gene:2504769687; PFAM: Biopolymer transport protein ExbD/TolR.
  
 
   0.472
AEE48242.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: phe:Phep_4090 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Outer membrane transport energization protein ExbB; IMG reference gene:2504769685; PFAM: MotA/TolQ/ExbB proton channel family.
  
   
 0.432
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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