Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51615.1Protein of unknown function DUF214; InterPro IPR003838; KEGG: rrs:RoseRS_1075 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504773144; PFAM: Predicted permease. (778 aa)    
Predicted Functional Partners:
AEE51614.1
Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cyclic nucleotide-binding protein; IMG reference gene:2504773143; PFAM: ABC transporter.
  
  
 0.807
AEE51613.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_1103 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; IMG reference gene:2504773142; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.460
AEE49737.1
KEGG: fjo:Fjoh_3683 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771213.
 
     0.414
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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