Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51827.1ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140; KEGG: slo:Shew_3087 lipid ABC transporter ATPase/inner membrane protein; PFAM: ABC transporter, transmembrane region; SPTR: Lipid A ABC exporter family, fused ATPase and inner membrane subunits; IMG reference gene:2504773364; PFAM: ABC transporter transmembrane region. (548 aa)    
Predicted Functional Partners:
AEE51828.1
Putative membrane protein; InterPro IPR019861; KEGG: fjo:Fjoh_2274 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504773365; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
       0.723
AEE51829.1
Peptidase C14 caspase catalytic subunit p20; InterPro IPR011600; KEGG: tsi:TSIB_0743 hypothetical protein; PFAM: Peptidase C14, caspase catalytic; SPTR: Putative uncharacterized protein; IMG reference gene:2504773366; PFAM: Caspase domain.
       0.723
AEE51830.1
Peptidase C1A papain; InterPro IPR000668; KEGG: dfe:Dfer_0574 peptidase C1A papain; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal; SPTR: Cysteine protease, putative; IMG reference gene:2504773367; PFAM: Papain family cysteine protease.
       0.676
AEE51831.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504773368.
       0.676
AEE51826.1
KEGG: cgb:cg0287 malic enzyme; SPTR: Putative uncharacterized protein Cgl0234; IMG reference gene:2504773363; PFAM: Protein of unknown function (DUF1611).
 
     0.663
AEE51142.1
COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: phe:Phep_0669 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane region; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; manually curated; IMG reference gene:2504772663; PFAM: ABC transporter transmembrane region; ABC transporter.
  
     0.517
AEE51832.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: sli:Slin_1208 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504773369; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.432
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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