Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE51883.1KEGG: rmr:Rmar_0283 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773420. (347 aa)    
Predicted Functional Partners:
AEE51882.1
KEGG: rmr:Rmar_0282 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773419.
 
     0.902
AEE51881.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2819 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504773418; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.880
AEE48105.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: srm:SRM_02396 putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; SPTR: Putative TonB dependent receptor; IMG reference gene:2504769544; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.774
AEE54204.1
KEGG: chu:CHU_1548 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775793.
  
     0.761
AEE53617.1
KEGG: cts:Ctha_0078 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775192.
  
     0.755
AEE50929.1
Lipopolysaccharide biosynthesis protein; InterPro IPR003856; KEGG: gsu:GSU1855 capsule polysaccharide export protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Capsule polysaccharide export protein, putative; IMG reference gene:2504772446; PFAM: Chain length determinant protein.
  
     0.753
AEE54127.1
KEGG: cts:Ctha_2374 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775716.
  
     0.750
AEE51712.1
KEGG: cts:Ctha_2374 hypothetical protein; SPTR: Cohesin domain protein; IMG reference gene:2504773245.
  
     0.746
AEE53176.1
KEGG: chu:CHU_0076 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774749.
  
     0.746
AEE52688.1
KEGG: cts:Ctha_2374 hypothetical protein; SPTR: Cohesin domain protein; IMG reference gene:2504774251.
  
     0.739
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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