Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEE51913.1KEGG: rbi:RB2501_08615 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773451. (137 aa)    
Predicted Functional Partners:
AEE51914.1
KEGG: sli:Slin_5108 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773452.
       0.482
AEE51911.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_0946 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504773449; PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease.
       0.412
AEE51912.1
InterPro IPR003838; KEGG: cpi:Cpin_2464 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504773450; PFAM: Predicted permease.
       0.412
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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