Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE51959.1KEGG: tgr:Tgr7_2980 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773499; PFAM: Protein of unknown function (DUF3532). (90 aa)    
Predicted Functional Partners:
AEE51960.1
KEGG: slt:Slit_2186 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773500.
 
    0.951
AEE51951.1
Protein of unknown function DUF497; COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: cyt:cce_4948 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein; IMG reference gene:2504773491; PFAM: Protein of unknown function (DUF497).
  
   
 0.497
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.468
AEE49656.1
COGs: COG4634 conserved hypothetical protein; KEGG: hde:HDEF_1048 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771129.
  
     0.444
AEE50249.1
COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: mar:MAE_40120 PilT-like protein; PFAM: PilT protein, N-terminal; SPTR: PilT-like protein; IMG reference gene:2504771741; PFAM: PIN domain.
 
   
 0.443
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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