Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52001.1Hypothetical protein; KEGG: cak:Caul_0036 TPR repeat-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773541. (494 aa)    
Predicted Functional Partners:
AEE52003.1
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: rbi:RB2501_09805 putative transmembrane protein; PFAM: Peptidase S54, rhomboid; SPTR: Putative transmembrane protein; IMG reference gene:2504773543; PFAM: Rhomboid family.
  
    0.564
AEE52002.1
Peptidase M61 domain protein; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR007963; KEGG: zpr:ZPR_2276 M61 family glycyl aminopeptidase; PFAM: Peptidase M61; SPTR: M61 family glycyl aminopeptidase; IMG reference gene:2504773542; PFAM: M61 glycyl aminopeptidase.
       0.561
AEE52000.1
Protein of unknown function DUF1684; COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: sli:Slin_4806 protein of unknown function DUF1684; PFAM: Protein of unknown function DUF1684; SPTR: Putative uncharacterized protein; IMG reference gene:2504773540; PFAM: Protein of unknown function (DUF1684).
       0.551
AEE51999.1
Isopenicillin-N epimerase; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sli:Slin_6132 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Isopenicillin-N epimerase; SPTR: Aminotransferase class V; IMG reference gene:2504773539; PFAM: Aminotransferase class-V.
       0.409
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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