Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52013.1InterPro IPR001647; KEGG: regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; IMG reference gene:2504773553; PFAM: Bacterial regulatory proteins, tetR family. (242 aa)    
Predicted Functional Partners:
AEE51101.1
KEGG: cat:CA2559_06475 hypothetical protein; SPTR: Putative membrane fusion protein, efflux; IMG reference gene:2504772621.
 
     0.743
AEE51100.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rbi:RB2501_08275 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; IMG reference gene:2504772620; PFAM: Outer membrane efflux protein.
 
     0.710
AEE51102.1
Xenobiotic-transporting ATPase; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: mtt:Ftrac_2278 hlyb/MsbA family ABC transporter; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SPTR: HlyB/MsbA family ABC transporter; IMG reference gene:2504772622; PFAM: ABC transporter transmembrane region.
 
     0.697
AEE52014.1
Peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR003718:IPR019904; KEGG: cpi:Cpin_0381 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; IMG reference gene:2504773554; PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
     
 0.557
AEE49249.1
KEGG: cat:CA2559_08646 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770715.
  
     0.491
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
    0.489
AEE50050.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: mtt:Ftrac_2163 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; IMG reference gene:2504771533; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.481
AEE48823.1
InterPro IPR019619; KEGG: sli:Slin_2451 protein of unknown function DUF2490; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; IMG reference gene:2504770282; PFAM: Protein of unknown function (DUF2490).
 
     0.457
AEE50198.1
InterPro IPR019619; KEGG: sli:Slin_2451 protein of unknown function DUF2490; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; IMG reference gene:2504771688; PFAM: Protein of unknown function (DUF2490).
 
     0.425
AEE51956.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2163 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug domain protein; IMG reference gene:2504773496; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.