Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52027.1KEGG: cyn:Cyan7425_1049 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773567. (148 aa)    
Predicted Functional Partners:
AEE48762.1
KEGG: dfe:Dfer_1169 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770217.
  
     0.560
AEE48695.1
KEGG: sli:Slin_1654 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770148.
  
     0.549
AEE48761.1
KEGG: dfe:Dfer_1168 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770216.
  
     0.507
AEE48696.1
KEGG: dfe:Dfer_1168 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770149.
  
     0.482
AEE54064.1
Globin; COGs: COG2346 Truncated hemoglobins; InterPro IPR001486; KEGG: nde:NIDE0437 hemoglobin-like protein; PFAM: Globin, truncated bacterial-like; SPTR: Hemoglobin-like protein; IMG reference gene:2504775651; PFAM: Bacterial-like globin.
  
     0.476
AEE52026.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: rmr:Rmar_0906 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28; IMG reference gene:2504773566; PFAM: Peptidase family M28.
       0.437
AEE49868.1
KEGG: lwe:lwe2314 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771344.
  
     0.435
AEE51139.1
KEGG: chu:CHU_1318 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772660; PFAM: Protein of unknown function (DUF3089).
  
     0.421
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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