Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE52084.1TatD-related deoxyribonuclease; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130; KEGG: phe:Phep_4182 TatD-related deoxyribonuclease; PFAM: Deoxyribonuclease, TatD-related; SPTR: TatD-related deoxyribonuclease; manually curated; IMG reference gene:2504773625; PFAM: TatD related DNase. (222 aa)    
Predicted Functional Partners:
AEE52083.1
UBA/THIF-type NAD/FAD binding protein; COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594; KEGG: ran:Riean_1332 uba/ThiF-type nad/fad binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: UBA/THIF-type NAD/FAD binding protein; IMG reference gene:2504773624; PFAM: ThiF family.
 
     0.858
AEE52085.1
COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: ran:Riean_1525 uracil phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; IMG reference gene:2504773626; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase.
       0.715
AEE52086.1
Transglutaminase domain-containing protein; COGs: COG5279 Uncharacterized protein involved in cytokinesis contains TGc (transglutaminase/protease-like) domain; InterPro IPR002931; KEGG: cpi:Cpin_1704 transglutaminase domain protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase domain protein; IMG reference gene:2504773627; PFAM: Transglutaminase-like superfamily.
  
    0.550
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
  
 0.548
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.479
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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