Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52096.1InterPro IPR000477; KEGG: tit:Thit_0663 hypothetical protein; PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: RNA-directed DNA polymerase (Reverse transcriptase); IMG reference gene:2504773638; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase). (696 aa)    
Predicted Functional Partners:
AEE48727.1
KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770180; PFAM: MerC mercury resistance protein.
  
     0.494
AEE53713.1
KEGG: str:Sterm_3233 hypothetical protein; SPTR: Membrane protein, putative; IMG reference gene:2504775288; PFAM: Vault protein inter-alpha-trypsin.
  
     0.469
AEE52097.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594:IPR000014; KEGG: multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS; IMG reference gene:2504773639; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box.
       0.455
AEE51511.1
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2895 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; IMG reference gene:2504773040; PFAM: FecR protein.
  
     0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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