Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEE52144.1KEGG: swd:Swoo_0115 lysyl endopeptidase; PRIAM: Lysyl endopeptidase; SPTR: Lysyl endopeptidase; IMG reference gene:2504773686; PFAM: Trypsin. (927 aa)    
Predicted Functional Partners:
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
  
 0.706
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.702
AEE50556.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: chu:CHU_3266 DNA-dependent ATPase I and helicase II; PFAM: DNA helicase, UvrD/REP type; SPTR: DNA-dependent ATPase I and helicase II; IMG reference gene:2504772059; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
  
 0.668
AEE53940.1
COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR013520:IPR000305:IPR006055; KEGG: gfo:GFO_0663 exonuclease family protein; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; IMG reference gene:2504775520; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.
   
  
 0.651
AEE52556.1
KEGG: ppg:PputGB1_3117 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774114.
 
    0.535
AEE50094.1
Colicin V production protein; InterPro IPR003825; KEGG: chu:CHU_3405 hypothetical protein; PFAM: Colicin V production protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771579; PFAM: Colicin V production protein.
 
     0.526
AEE50653.1
InterPro IPR019734:IPR001440; KEGG: slt:Slit_1111 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein; IMG reference gene:2504772156.
  
     0.503
AEE49179.1
Hypothetical protein; KEGG: tva:TVAG_087170 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative; IMG reference gene:2504770645.
 
     0.501
AEE51881.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2819 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504773418; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.498
AEE49591.1
Hypothetical protein; KEGG: bpb:bpr_IV147 McrBC restriction endonuclease system protein McrB; SPTR: Putative uncharacterized protein; IMG reference gene:2504771063.
  
     0.490
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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