Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52166.1Hypothetical protein; IMG reference gene:2504773708. (126 aa)    
Predicted Functional Partners:
AEE52165.1
Biotin/lipoyl attachment domain-containing protein; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: mtt:Ftrac_3017 biotin/lipoyl attachment domain-containing protein; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein; IMG reference gene:2504773707; PFAM: Biotin-requiring enzyme.
       0.559
AEE52167.1
KEGG: cat:CA2559_03030 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773709.
       0.554
AEE52168.1
Protein of unknown function DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: ppn:Palpr_0804 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein; IMG reference gene:2504773710; PFAM: Protein of unknown function, DUF583.
       0.549
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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