Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52183.1LytTr DNA-binding region; InterPro IPR007492; KEGG: sli:Slin_2067 response regulator receiver protein; PFAM: LytTr DNA-binding region; SPTR: Response regulator receiver protein; IMG reference gene:2504773725; PFAM: LytTr DNA-binding domain. (285 aa)    
Predicted Functional Partners:
AEE52049.1
Response regulator receiver; InterPro IPR001789; KEGG: sli:Slin_2868 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; IMG reference gene:2504773590; PFAM: Response regulator receiver domain.
  
     0.595
AEE53005.1
KEGG: dfe:Dfer_2367 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774577.
  
     0.484
AEE50050.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: mtt:Ftrac_2163 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; IMG reference gene:2504771533; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.472
AEE52182.1
KEGG: dfe:Dfer_1870 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773724.
       0.472
AEE51956.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2163 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug domain protein; IMG reference gene:2504773496; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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