Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52188.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: mtt:Ftrac_3516 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; IMG reference gene:2504773730; PFAM: Helix-turn-helix. (173 aa)    
Predicted Functional Partners:
AEE52187.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bth:BT_3069 putative disulphide-isomerase; PFAM: Sporulation/cell division region, bacteria; SPTR: Putative disulphide-isomerase; IMG reference gene:2504773729; PFAM: Thioredoxin; Sporulation related domain.
       0.547
AEE53597.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775172.
  
     0.466
AEE49879.1
KEGG: chu:CHU_2286 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771360.
  
     0.426
AEE48215.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_1194 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504769658; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.423
AEE52186.1
KEGG: lby:Lbys_0384 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773728.
 
     0.415
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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