Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52214.1KEGG: sli:Slin_4148 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773757. (99 aa)    
Predicted Functional Partners:
AEE52213.1
InterPro IPR010839; KEGG: sli:Slin_4147 protein of unknown function DUF1446; PFAM: Protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; IMG reference gene:2504773756; PFAM: Protein of unknown function (DUF1446).
 
     0.888
AEE52212.1
citrate/H+ symporter, CitMHS family; COGs: COG2851 H+/citrate symporter; InterPro IPR004680:IPR014738; KEGG: sli:Slin_4146 citrate/H+ symporter, CitMHS family; PFAM: Divalent ion symporter; SPTR: Citrate/H+ symporter, CitMHS family; TIGRFAM: Citrate transporter; IMG reference gene:2504773755; PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family.
 
     0.844
AEE52215.1
BNR/Asp-box repeat domain protein; COGs: COG4692 neuraminidase (sialidase); KEGG: sli:Slin_1808 BNR/Asp-box repeat domain protein; SPTR: BNR/Asp-box repeat domain protein; IMG reference gene:2504773758.
       0.556
AEE52216.1
SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: sli:Slin_6588 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; IMG reference gene:2504773759; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.508
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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