Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEE52229.1Polygalacturonase; COGs: COG5434 Endopygalactorunase; InterPro IPR001087:IPR000743:IPR006626; KEGG: lby:Lbys_1641 glycoside hydrolase family 28; PFAM: Glycoside hydrolase, family 28; Lipase, GDSL; PRIAM: Polygalacturonase; SPTR: Glycoside hydrolase family 28; IMG reference gene:2504773772; PFAM: Glycosyl hydrolases family 28; GDSL-like Lipase/Acylhydrolase. (778 aa)    
Predicted Functional Partners:
AEE52239.1
Glycosyl hydrolase family 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: dfe:Dfer_2841 glycosyl hydrolase family 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase family 88; IMG reference gene:2504773782; PFAM: Glycosyl Hydrolase Family 88.
   
 0.886
AEE52240.1
Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: ote:Oter_4090 pectinesterase; PFAM: Pectinesterase, catalytic; SPTR: Pectinesterase; IMG reference gene:2504773783; PFAM: Pectinesterase.
 
   
 0.819
kduI
4-deoxy-L-threo-5-hexosulose-uronateketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.807
AEE52224.1
Pectate lyase/Amb allergen; InterPro IPR002022; KEGG: phe:Phep_0772 hypothetical protein; PFAM: Pectate lyase/Amb allergen; SPTR: Putative uncharacterized protein; IMG reference gene:2504773767.
 
   
 0.785
AEE52223.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: cpi:Cpin_5511 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase family 43; IMG reference gene:2504773766; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.770
AEE52227.1
Pectate lyase; InterPro IPR012669; KEGG: lby:Lbys_1624 pectate lyase; PFAM: Pectic acid lyase; SPTR: Pectate lyase; TIGRFAM: Pectic acid lyase; IMG reference gene:2504773770; PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
 
   
 0.763
AEE49863.1
KEGG: mva:Mvan_5913 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin; IMG reference gene:2504771339; PFAM: Pectate lyase.
 
   
 0.712
AEE52221.1
InterPro IPR012944; KEGG: phe:Phep_0771 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773764; PFAM: SusD family.
 
   0.642
AEE52242.1
Tagaturonate reductase; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: sli:Slin_1247 mannitol dehydrogenase domain protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Tagaturonate reductase; SPTR: Mannitol dehydrogenase domain protein; IMG reference gene:2504773785; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain.
 
   
 0.641
AEE52203.1
KEGG: dfe:Dfer_3461 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773746.
 
 
 0.636
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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