Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52270.1FAD dependent oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: kfl:Kfla_2095 amine oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Amine oxidase; IMG reference gene:2504773815; PFAM: Flavin containing amine oxidoreductase. (512 aa)    
Predicted Functional Partners:
AEE50361.1
Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: mtt:Ftrac_1471 phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Phytoene synthase; IMG reference gene:2504771857; PFAM: Squalene/phytoene synthase.
  
  
 0.505
AEE50622.1
Domain of unknown function DUF1990-containing protein; COGs: COG4762 conserved hypothetical protein; InterPro IPR018960; KEGG: plm:Plim_1443 hypothetical protein; PFAM: Domain of unknown function DUF1990; SPTR: Putative uncharacterized protein; IMG reference gene:2504772125; PFAM: Domain of unknown function (DUF1990).
  
     0.479
AEE53843.1
Alditol oxidase; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR007173; KEGG: sli:Slin_6373 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; D-arabinono-1,4-lactone oxidase; PRIAM: Alditol oxidase; SPTR: Sorbitol oxidase; IMG reference gene:2504775422; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain.
  
     0.442
AEE50454.1
KEGG: sli:Slin_6099 zinc finger UBP-type protein; SPTR: Zinc finger UBP-type protein; IMG reference gene:2504771955; PFAM: Zn-finger in ubiquitin-hydrolases and other protein.
  
     0.436
AEE52271.1
KEGG: ppn:Palpr_0675 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773816.
       0.426
AEE52269.1
Ethyl tert-butyl ether degradation EthD; InterPro IPR009799; KEGG: pca:Pcar_0984 hypothetical protein; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: Ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; IMG reference gene:2504773814; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein.
       0.410
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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