Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52289.1Putative membrane protein; InterPro IPR019861; KEGG: sli:Slin_3585 hypothetical protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504773835; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (323 aa)    
Predicted Functional Partners:
AEE52290.1
Hypothetical protein; KEGG: chu:CHU_3440 glycoside hydrolase family 8 protein; SPTR: CHU large protein; IMG reference gene:2504773836.
 
     0.804
AEE51716.1
Putative membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_1889 membrane protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504773249; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.684
AEE52291.1
Peptidase domain protein; InterPro IPR007280; KEGG: chu:CHU_2924 hypothetical protein; PFAM: Peptidase, C-terminal, archaeal/bacterial; SPTR: Putative uncharacterized protein; IMG reference gene:2504773837.
 
     0.658
AEE49345.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_5753 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; IMG reference gene:2504770812; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.559
AEE49108.1
KEGG: fps:FP0688 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770572.
  
     0.537
AEE49162.1
KEGG: cpi:Cpin_1677 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770628.
  
     0.534
AEE53811.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284; KEGG: lby:Lbys_1636 RNA polymerase sigma factor, sigma-70 family; SPTR: RNA polymerase sigma-70 factor, ECF subfamily, putative; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504775389; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
     0.533
AEE53592.1
PKD domain containing protein; InterPro IPR000601:IPR002884; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; Proprotein convertase, P; SMART: PKD; SPTR: Putative uncharacterized protein; IMG reference gene:2504775167; PFAM: PKD domain.
  
     0.521
AEE51285.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627; KEGG: phe:Phep_3304 RNA polymerase sigma factor, sigma-70 family; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504772810; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
     0.513
AEE51356.1
Sporulation domain-containing protein; InterPro IPR011659:IPR007730; KEGG: chu:CHU_1796 outer membrane protein 3A; PFAM: Sporulation/cell division region, bacteria; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein; IMG reference gene:2504772882; PFAM: WD40-like Beta Propeller Repeat; Sporulation related domain.
  
     0.498
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.