Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
AEE52312.1COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: cpi:Cpin_0927 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein, putative; TIGRFAM: ComEC/Rec2-related protein; IMG reference gene:2504773858; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein. (690 aa)    
Predicted Functional Partners:
AEE52073.1
DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488:IPR003583; KEGG: cpi:Cpin_6935 DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; SPTR: DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; IMG reference gene:2504773614; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.
 
  
 0.890
AEE51802.1
COGs: COG1040 amidophosphoribosyltransferase; KEGG: phe:Phep_3856 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; IMG reference gene:2504773339; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
 
  
 0.886
AEE52313.1
KEGG: sli:Slin_1689 DNA uptake protein and related DNA-binding protein-like protein; SPTR: DNA uptake protein and related DNA-binding protein-like protein; IMG reference gene:2504773859.
 
  
 0.776
AEE50485.1
Mg chelatase, subunit ChlI; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR000523:IPR003593; KEGG: mtt:Ftrac_2624 mg chelatase, subunit chli; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; IMG reference gene:2504771987; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.
 
  
 0.763
AEE51718.1
UPF0102 protein yraN; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: phe:Phep_0277 protein of unknown function UPF0102; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein PBAL39_09761; IMG reference gene:2504773251; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; Belongs to the UPF0102 family.
  
    0.588
AEE52311.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: gfo:GFO_3253 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Putative uncharacterized protein; IMG reference gene:2504773857; PFAM: Sporulation related domain.
  
    0.516
AEE53486.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR001789:IPR 013656:IPR013767; KEGG: ppn:Palpr_2639 pas/pac sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response reg [...]
  
    0.499
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
     0.485
AEE48214.1
KEGG: mtt:Ftrac_1165 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769657.
 
  
 0.470
AEE49742.1
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: cpi:Cpin_6265 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: Cell divisionFtsK/SpoIIIE; IMG reference gene:2504771218; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
 
  
 0.466
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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