Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52313.1KEGG: sli:Slin_1689 DNA uptake protein and related DNA-binding protein-like protein; SPTR: DNA uptake protein and related DNA-binding protein-like protein; IMG reference gene:2504773859. (314 aa)    
Predicted Functional Partners:
AEE52312.1
COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: cpi:Cpin_0927 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein, putative; TIGRFAM: ComEC/Rec2-related protein; IMG reference gene:2504773858; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein.
 
  
 0.776
AEE51406.1
KEGG: phe:Phep_3068 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772932; PFAM: Protein of unknown function (DUF2851).
 
     0.579
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.549
AEE49412.1
Hypothetical protein; KEGG: cpi:Cpin_4394 PKD domain containing protein; SPTR: PKD domain containing protein; IMG reference gene:2504770881.
  
     0.533
lspA-2
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
   
 0.515
AEE51818.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.503
AEE51437.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: zpr:ZPR_0488 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase; IMG reference gene:2504772964; PFAM: Uroporphyrinogen-III synthase HemD.
  
     0.499
AEE52683.1
KEGG: ppn:Palpr_2067 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774246.
  
     0.498
AEE53847.1
KEGG: mtt:Ftrac_0993 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775426.
  
     0.478
AEE49616.1
3'-5' exonuclease, PolB; InterPro IPR019288; KEGG: fjo:Fjoh_0877 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504771088; PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB.
  
     0.465
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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