Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52358.1COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: sli:Slin_4469 peptidase S45 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; PRIAM: Glutaryl-7-aminocephalosporanic-acid acylase; SPTR: Peptidase S45 penicillin amidase; IMG reference gene:2504773905; PFAM: Penicillin amidase. (726 aa)    
Predicted Functional Partners:
AEE51999.1
Isopenicillin-N epimerase; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sli:Slin_6132 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Isopenicillin-N epimerase; SPTR: Aminotransferase class V; IMG reference gene:2504773539; PFAM: Aminotransferase class-V.
  
    0.479
AEE52359.1
Sulphatase-modifying factor protein; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: cts:Ctha_2336 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; IMG reference gene:2504773906; PFAM: Formylglycine-generating sulfatase enzyme.
  
    0.477
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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