Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52390.1Anti-sigma-K factor RskA; InterPro IPR018764; KEGG: sli:Slin_3072 anti-sigma-K factor RskA; PFAM: Anti-sigma K factor RskA; SPTR: Anti-sigma-K factor RskA; IMG reference gene:2504773937; PFAM: Anti-sigma-K factor rskA. (246 aa)    
Predicted Functional Partners:
AEE52391.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR007630:IPR014284; KEGG: sli:Slin_3071 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504773938; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
 
   0.876
AEE52389.1
Putative signal transduction histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR001440:IPR010559:IPR003594:IPR019734; KEGG: cpi:Cpin_6624 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; ATP-binding region, ATPase-like; SMART: Tetratricopeptide repeat; SPTR: Possible sensor protein; IMG reference gene:2504773936; PFAM: Histidine kinase.
       0.553
AEE54190.1
KEGG: phe:Phep_2190 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775779.
  
     0.537
AEE51810.1
InterPro IPR003088; KEGG: cpi:Cpin_0529 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; IMG reference gene:2504773347; PFAM: Cytochrome c.
  
     0.505
AEE49214.1
Hypothetical protein; InterPro IPR006311; KEGG: cpi:Cpin_0629 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770680.
 
     0.497
AEE50272.1
KEGG: sli:Slin_1648 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771765; PFAM: Protein of unknown function (DUF983).
  
     0.489
AEE52392.1
InterPro IPR011647; KEGG: cki:Calkr_1515 kwg repeat protein; PFAM: KWG Leptospira; SPTR: KWG repeat protein; IMG reference gene:2504773939; PFAM: KWG Leptospira.
       0.480
AEE49213.1
KEGG: cpi:Cpin_0630 hypothetical protein; SPTR: Dessication-associated protein; IMG reference gene:2504770679.
 
     0.463
AEE51064.1
KEGG: sli:Slin_1159 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772583.
  
     0.434
AEE49284.1
KEGG: rbi:RB2501_13754 Maf-like protein; SPTR: Maf-like protein; IMG reference gene:2504770750.
 
     0.419
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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