STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE52402.1TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4206 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; IMG reference gene:2504773950; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1016 aa)    
Predicted Functional Partners:
AEE52403.1
InterPro IPR012944; KEGG: sli:Slin_4207 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773951; PFAM: SusD family.
 
     0.915
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
  
     0.745
AEE52636.1
InterPro IPR012944; KEGG: cpi:Cpin_0455 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774196; PFAM: SusD family.
  
     0.665
AEE53020.1
KEGG: sli:Slin_4662 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774592; PFAM: Protein of unknown function (DUF3179).
  
     0.639
AEE52959.1
KEGG: sli:Slin_3399 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774531.
  
     0.638
AEE53661.1
InterPro IPR012944; KEGG: sli:Slin_4041 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775236; PFAM: SusD family.
  
     0.621
AEE51366.1
InterPro IPR012944; KEGG: sli:Slin_2992 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504772892; PFAM: SusD family.
  
     0.599
AEE53512.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2699 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504775087; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.546
AEE49700.1
InterPro IPR012944; KEGG: dfe:Dfer_2522 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504771176; PFAM: SusD family.
  
     0.543
AEE48255.1
InterPro IPR012944; KEGG: dfe:Dfer_4947 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504769698; PFAM: SusD family.
  
     0.541
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.