Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52451.1COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: cat:CA2559_01560 alpha/beta hydrolase superfamily protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase superfamily, putative; IMG reference gene:2504774007; PFAM: alpha/beta hydrolase fold. (288 aa)    
Predicted Functional Partners:
AEE52449.1
InterPro IPR014284; KEGG: cpi:Cpin_1935 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504774005; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.512
AEE52450.1
Hypothetical protein; IMG reference gene:2504774006.
       0.512
AEE52452.1
Hypothetical protein; IMG reference gene:2504774008.
       0.459
AEE52448.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734:IPR001440; KEGG: ter:Tery_3497 peptidase-like; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat domain protein; IMG reference gene:2504774004.
 
     0.448
AEE54209.1
KEGG: sli:Slin_2514 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775798.
  
     0.430
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.