Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52515.1Helix-turn-helix domain-containing protein AraC type; InterPro IPR018060:IPR000005; KEGG: lby:Lbys_1647 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2504774072; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (626 aa)    
Predicted Functional Partners:
AEE48325.1
KEGG: sli:Slin_2828 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769769.
  
     0.637
AEE48804.1
KEGG: sli:Slin_2828 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770263.
  
     0.604
AEE49715.1
KEGG: sli:Slin_0180 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771191.
  
     0.546
AEE52516.1
Hypothetical protein; IMG reference gene:2504774073.
       0.490
AEE52517.1
Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: sli:Slin_5972 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative phosphoesterase, PA-phosphatase related protein; IMG reference gene:2504774074; PFAM: PAP2 superfamily.
       0.439
AEE48639.1
InterPro IPR013096; KEGG: sjp:SJA_C2-01010 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504770089; PFAM: Cupin domain.
 
 
   0.431
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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