Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE52535.1Hypothetical protein; KEGG: thiol-activated cytolysin; SPTR: Putative uncharacterized protein; IMG reference gene:2504774093; PFAM: Thiol-activated cytolysin. (570 aa)    
Predicted Functional Partners:
AEE52534.1
Hypothetical protein; IMG reference gene:2504774092.
       0.541
AEE52536.1
KEGG: gbr:Gbro_3808 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774094.
       0.536
AEE51855.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5373 putative lipoprotein; SPTR: Putative 28 kDa outer membrane protein Omp28; IMG reference gene:2504773392; PFAM: Outer membrane protein Omp28.
  
     0.520
AEE50797.1
KEGG: nve:NEMVE_v1g226043 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772307.
 
     0.464
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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