Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52623.1Hypothetical protein; IMG reference gene:2504774181. (78 aa)    
Predicted Functional Partners:
AEE52621.1
Protein of unknown function DUF422; InterPro IPR007354; KEGG: mtt:Ftrac_1977 hypothetical protein; PFAM: Protein of unknown function DUF422; SPTR: Membrane protein, putative; IMG reference gene:2504774179; PFAM: Protein of unknown function (DUF422).
       0.541
AEE52622.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105:IPR002937; KEGG: mtt:Ftrac_1976 phytoene desaturase; PFAM: Amine oxidase; SPTR: Gamma-carotene desaturase; TIGRFAM: Zeta-phytoene desaturase; IMG reference gene:2504774180; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
       0.541
AEE52620.1
Fatty acid hydroxylase; InterPro IPR006694; KEGG: fbc:FB2170_07634 beta carotene hydroxylase CrtZ; PFAM: Fatty acid hydroxylase; SPTR: Beta-carotene hydroxylase; IMG reference gene:2504774178; PFAM: Fatty acid hydroxylase superfamily.
       0.517
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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