Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52628.1Hypothetical protein; KEGG: cts:Ctha_1865 filamentous haemagglutinin family outer membrane protein; SPTR: Filamentous haemagglutinin family outer membrane protein; IMG reference gene:2504774187. (404 aa)    
Predicted Functional Partners:
AEE52627.1
Helix-turn-helix domain protein; InterPro IPR001387:IPR018841; KEGG: gfo:GFO_0945 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF2442; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2504774186; PFAM: Protein of unknown function (DUF2442); Helix-turn-helix.
       0.481
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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