Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE52666.1Ribonuclease H-related protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (218 aa)    
Predicted Functional Partners:
AEE52665.1
Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130; KEGG: cpi:Cpin_0246 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; IMG reference gene:2504774227; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
       0.536
AEE52946.1
Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: sli:Slin_3442 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; IMG reference gene:2504774518; PFAM: Protein of unknown function (Porph_ging).
 
     0.426
AEE51356.1
Sporulation domain-containing protein; InterPro IPR011659:IPR007730; KEGG: chu:CHU_1796 outer membrane protein 3A; PFAM: Sporulation/cell division region, bacteria; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein; IMG reference gene:2504772882; PFAM: WD40-like Beta Propeller Repeat; Sporulation related domain.
  
     0.415
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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