Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE52679.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: dfe:Dfer_4121 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2504774242; PFAM: Bacterial regulatory proteins, lacI family; family. (335 aa)    
Predicted Functional Partners:
AEE49080.1
COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: chu:CHU_3776 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (NADH) large subunit; IMG reference gene:2504770544; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
 
 0.804
AEE49199.1
ABC-type transporter, integral membrane subunit; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: aac:Aaci_2903 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2504770665; PFAM: Branched-chain amino acid transport system / permease component.
 
  
 0.574
AEE49200.1
COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: tnp:Tnap_0914 inner-membrane translocator; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Inner-membrane translocator; IMG reference gene:2504770666; PFAM: ABC transporter.
 
  
 0.457
AEE54024.1
Cyclomaltodextrin glucanotransferase; COGs: COG0366 Glycosidase; InterPro IPR015171:IPR006047:IPR019492:IPR006589; KEGG: gfo:GFO_2133 alpha amylase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase; IMG reference gene:2504775610; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain.
 
  
 0.450
AEE52680.1
CHP02436-containing protein; InterPro IPR012657; KEGG: ant:Arnit_1086 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02436; IMG reference gene:2504774243; PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein.
       0.437
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.428
AEE53454.1
Cyclomaltodextrinase; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR015171:IPR006047:IPR019492; KEGG: cpi:Cpin_5089 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; PRIAM: Cyclomaltodextrinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region; IMG reference gene:2504775029; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain.
 
  
 0.414
AEE49198.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: csc:Csac_0242 periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative uncharacterized protein; IMG reference gene:2504770664; PFAM: family.
 
  
 0.408
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.