Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (298 aa)    
Predicted Functional Partners:
AEE52706.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: cpi:Cpin_0522 cytochrome-c oxidase; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome-c oxidase; IMG reference gene:2504774271; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
AEE52708.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: sli:Slin_5674 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III; IMG reference gene:2504774273; PFAM: Cytochrome c oxidase subunit III.
 
 
 0.998
AEE52709.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: zpr:ZPR_0597 cytochrome o ubiquinol oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome o ubiquinol oxidase subunit III; IMG reference gene:2504774274; PFAM: Cytochrome c oxidase subunit III.
 
 
 0.997
AEE52705.1
OmpA/MotB domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.995
AEE48687.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mtt:Ftrac_3696 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III; IMG reference gene:2504770139; PFAM: Cytochrome c oxidase subunit III.
 
 
 0.988
AEE50864.1
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: app:CAP2UW1_1793 cytochrome oxidase assembly; PFAM: Cytochrome oxidase assembly; SPTR: Heme A synthase; IMG reference gene:2504772375; PFAM: Cytochrome oxidase assembly protein.
 
 0.987
AEE52710.1
KEGG: cpi:Cpin_0518 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774275.
    
  0.959
AEE47924.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase, cbb3-type; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO; IMG reference gene:2504769359; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; [...]
    
 0.943
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.923
AEE47922.1
InterPro IPR003088; KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain; PFAM: Cytochrome c, class I; SPTR: Cytochrome-c oxidase fixP chain; IMG reference gene:2504769357; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
  
 
 0.906
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.